Cluster: Rep_1286_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1286
- CGC Family ID: CGCFAM_03922
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1286_c_128 | Rep_1286_c_128_26 | 20356 | 21684 | + | 2.A.26.1.5 |
| TC | Rep_1286_c_128 | Rep_1286_c_128_27 | 22001 | 23362 | + | 2.A.22.5.3 |
| TC | Rep_1286_c_128 | Rep_1286_c_128_28 | 23644 | 25068 | + | 2.A.35.1.2 |
| CAZyme | Rep_1286_c_128 | Rep_1286_c_128_29 | 25072 | 25611 | + | GH73 |
| pfam | Rep_1286_c_128 | Rep_1286_c_128_30 | 25762 | 27888 | + | Ribonuc_red_lgC | ATP-cone |
| TC | Rep_1286_c_128 | Rep_1286_c_128_31 | 28104 | 29249 | + | 1.A.34.1.3 |
Gene ID: Rep_1286_c_128_26
Type: TC
Location: 20356 - 21684 (+)
Type: TC
Location: 20356 - 21684 (+)
Gene ID: Rep_1286_c_128_27
Type: TC
Location: 22001 - 23362 (+)
Type: TC
Location: 22001 - 23362 (+)
Gene ID: Rep_1286_c_128_28
Type: TC
Location: 23644 - 25068 (+)
Type: TC
Location: 23644 - 25068 (+)
Gene ID: Rep_1286_c_128_29
Type: CAZyme
Location: 25072 - 25611 (+)
Type: CAZyme
Location: 25072 - 25611 (+)
Gene ID: Rep_1286_c_128_30
Type: pfam
Location: 25762 - 27888 (+)
Type: pfam
Location: 25762 - 27888 (+)
Gene ID: Rep_1286_c_128_31
Type: TC
Location: 28104 - 29249 (+)
Type: TC
Location: 28104 - 29249 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Aedoeadaptatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.