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Cluster: Rep_1274_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1274_c_65 Rep_1274_c_65_2 398 1618 - 5.A.1.2.7
NULL(UNKNOWN) Rep_1274_c_65 Rep_1274_c_65_3 1720 2232 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1274_c_65 Rep_1274_c_65_4 2619 3191 - 2.A.115.1.1
pfam Rep_1274_c_65 Rep_1274_c_65_5 3182 3997 - S6PP | Hydrolase_3
CAZyme Rep_1274_c_65 Rep_1274_c_65_6 4046 5497 - GH1
TC Rep_1274_c_65 Rep_1274_c_65_7 5498 5836 - 4.A.3.2.7
TC Rep_1274_c_65 Rep_1274_c_65_8 5833 7149 - 4.A.3.2.3
TC Rep_1274_c_65 Rep_1274_c_65_9 7176 7472 - 4.A.3.2.2
TC Rep_1274_c_65 Rep_1274_c_65_10 7572 8201 - 2.A.115.2.5
Gene ID: Rep_1274_c_65_2
Type: TC
Location: 398 - 1618 (-)
Gene ID: Rep_1274_c_65_3
Type:
Location: 1720 - 2232 (-)
Gene ID: Rep_1274_c_65_4
Type: TC
Location: 2619 - 3191 (-)
Gene ID: Rep_1274_c_65_5
Type: pfam
Location: 3182 - 3997 (-)
Gene ID: Rep_1274_c_65_6
Type: CAZyme
Location: 4046 - 5497 (-)
Gene ID: Rep_1274_c_65_7
Type: TC
Location: 5498 - 5836 (-)
Gene ID: Rep_1274_c_65_8
Type: TC
Location: 5833 - 7149 (-)
Gene ID: Rep_1274_c_65_9
Type: TC
Location: 7176 - 7472 (-)
Gene ID: Rep_1274_c_65_10
Type: TC
Location: 7572 - 8201 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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