Cluster: Rep_126_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_126
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_126_c_2 | Rep_126_c_2_813 | 1031668 | 1032426 | - | 3.A.1.21.2 |
| TC | Rep_126_c_2 | Rep_126_c_2_814 | 1033085 | 1033717 | + | 1.C.113.1.3 |
| pfam | Rep_126_c_2 | Rep_126_c_2_815 | 1033771 | 1034148 | + | Ribonuc_L-PSP |
| pfam | Rep_126_c_2 | Rep_126_c_2_816 | 1034155 | 1034688 | + | Lysine_decarbox | LDcluster4 |
| CAZyme | Rep_126_c_2 | Rep_126_c_2_817 | 1035376 | 1036491 | + | GT28 |
Gene ID: Rep_126_c_2_813
Type: TC
Location: 1031668 - 1032426 (-)
Type: TC
Location: 1031668 - 1032426 (-)
Gene ID: Rep_126_c_2_814
Type: TC
Location: 1033085 - 1033717 (+)
Type: TC
Location: 1033085 - 1033717 (+)
Gene ID: Rep_126_c_2_815
Type: pfam
Location: 1033771 - 1034148 (+)
Type: pfam
Location: 1033771 - 1034148 (+)
Gene ID: Rep_126_c_2_816
Type: pfam
Location: 1034155 - 1034688 (+)
Type: pfam
Location: 1034155 - 1034688 (+)
Gene ID: Rep_126_c_2_817
Type: CAZyme
Location: 1035376 - 1036491 (+)
Type: CAZyme
Location: 1035376 - 1036491 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.