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Cluster: Rep_126_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_126_c_0 Rep_126_c_0_398 488920 490416 - GH13_6
pfam Rep_126_c_0 Rep_126_c_0_399 490489 491301 - SusF_N
pfam Rep_126_c_0 Rep_126_c_0_400 491373 492608 - SusE
TC Rep_126_c_0 Rep_126_c_0_401 492788 494410 - 8.A.46.1.1
TC Rep_126_c_0 Rep_126_c_0_402 494424 497507 - 1.B.14.6.1
CAZyme Rep_126_c_0 Rep_126_c_0_403 497699 499780 - GH97
NULL(UNKNOWN) Rep_126_c_0 Rep_126_c_0_404 500010 500117 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_126_c_0 Rep_126_c_0_405 501511 503370 - GH13_46
Gene ID: Rep_126_c_0_398
Type: CAZyme
Location: 488920 - 490416 (-)
Gene ID: Rep_126_c_0_399
Type: pfam
Location: 490489 - 491301 (-)
Gene ID: Rep_126_c_0_400
Type: pfam
Location: 491373 - 492608 (-)
Gene ID: Rep_126_c_0_401
Type: TC
Location: 492788 - 494410 (-)
Gene ID: Rep_126_c_0_402
Type: TC
Location: 494424 - 497507 (-)
Gene ID: Rep_126_c_0_403
Type: CAZyme
Location: 497699 - 499780 (-)
Gene ID: Rep_126_c_0_404
Type:
Location: 500010 - 500117 (-)
Gene ID: Rep_126_c_0_405
Type: CAZyme
Location: 501511 - 503370 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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