dbCAN HGM

Cluster: Rep_126_CGC21

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_126_c_2	Rep_126_c_2_1756	2241758	2242417	-	3.A.1.140.1
sulfatase	Rep_126_c_2	Rep_126_c_2_1757	2242456	2244237	-	S1_97
pfam	Rep_126_c_2	Rep_126_c_2_1758	2244314	2244865	-	dTDP_sugar_isom
TC	Rep_126_c_2	Rep_126_c_2_1759	2244885	2247416	-	3.A.9.1.2
pfam	Rep_126_c_2	Rep_126_c_2_1760	2248048	2250576	+	Poly_export \| SLBB \| SLBB \| SLBB \| SLBB \| SLBB \| SLBB \| SLBB_2 \| SLBB_2
TC	Rep_126_c_2	Rep_126_c_2_1761	2250745	2251824	+	9.B.146.1.4
pfam	Rep_126_c_2	Rep_126_c_2_1762	2251973	2253040	+	Wzz
TC	Rep_126_c_2	Rep_126_c_2_1763	2253066	2254343	+	2.A.66.2.1
pfam	Rep_126_c_2	Rep_126_c_2_1764	2254361	2255521	+	O_anti_polymase
CAZyme	Rep_126_c_2	Rep_126_c_2_1765	2255533	2256444	+	GT2
CAZyme	Rep_126_c_2	Rep_126_c_2_1766	2256693	2257790	+	GT4
CAZyme	Rep_126_c_2	Rep_126_c_2_1767	2257803	2258927	+	GT4

Gene ID: Rep_126_c_2_1756
Type: TC
Location: 2241758 - 2242417 (-)

Gene ID: Rep_126_c_2_1757
Type: sulfatase
Location: 2242456 - 2244237 (-)

Gene ID: Rep_126_c_2_1758
Type: pfam
Location: 2244314 - 2244865 (-)

Gene ID: Rep_126_c_2_1759
Type: TC
Location: 2244885 - 2247416 (-)

Gene ID: Rep_126_c_2_1760
Type: pfam
Location: 2248048 - 2250576 (+)

Gene ID: Rep_126_c_2_1761
Type: TC
Location: 2250745 - 2251824 (+)

Gene ID: Rep_126_c_2_1762
Type: pfam
Location: 2251973 - 2253040 (+)

Gene ID: Rep_126_c_2_1763
Type: TC
Location: 2253066 - 2254343 (+)

Gene ID: Rep_126_c_2_1764
Type: pfam
Location: 2254361 - 2255521 (+)

Gene ID: Rep_126_c_2_1765
Type: CAZyme
Location: 2255533 - 2256444 (+)

Gene ID: Rep_126_c_2_1766
Type: CAZyme
Location: 2256693 - 2257790 (+)

Gene ID: Rep_126_c_2_1767
Type: CAZyme
Location: 2257803 - 2258927 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.