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Cluster: Rep_1267_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1267_c_9 Rep_1267_c_9_7 7613 8767 + 3.A.11.1.1
STP Rep_1267_c_9 Rep_1267_c_9_8 8745 9353 + Pribosyltran
NULL(UNKNOWN) Rep_1267_c_9 Rep_1267_c_9_9 9399 10139 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1267_c_9 Rep_1267_c_9_10 10262 12646 + 3.A.5.1.3
pfam Rep_1267_c_9 Rep_1267_c_9_11 12704 13759 + RF-1 | PCRF
pfam Rep_1267_c_9 Rep_1267_c_9_12 13752 14633 + PseudoU_synth_2
CAZyme Rep_1267_c_9 Rep_1267_c_9_13 14627 15931 - GH13_20
Gene ID: Rep_1267_c_9_7
Type: TC
Location: 7613 - 8767 (+)
Gene ID: Rep_1267_c_9_8
Type: STP
Location: 8745 - 9353 (+)
Gene ID: Rep_1267_c_9_9
Type:
Location: 9399 - 10139 (+)
Gene ID: Rep_1267_c_9_10
Type: TC
Location: 10262 - 12646 (+)
Gene ID: Rep_1267_c_9_11
Type: pfam
Location: 12704 - 13759 (+)
Gene ID: Rep_1267_c_9_12
Type: pfam
Location: 13752 - 14633 (+)
Gene ID: Rep_1267_c_9_13
Type: CAZyme
Location: 14627 - 15931 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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