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Cluster: Rep_1267_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1267_c_7 Rep_1267_c_7_19 24474 25835 + 2.A.66.1.33
TC Rep_1267_c_7 Rep_1267_c_7_20 25862 26605 + 9.B.158.1.2
pfam Rep_1267_c_7 Rep_1267_c_7_21 26627 27553 - Mem_trans
TC Rep_1267_c_7 Rep_1267_c_7_22 27616 29079 - 3.A.1.121.1
peptidase Rep_1267_c_7 Rep_1267_c_7_23 29338 30612 + C40.UPW
pfam Rep_1267_c_7 Rep_1267_c_7_24 30720 31586 + DegV
CAZyme Rep_1267_c_7 Rep_1267_c_7_25 31590 33356 - GH13_9
Gene ID: Rep_1267_c_7_19
Type: TC
Location: 24474 - 25835 (+)
Gene ID: Rep_1267_c_7_20
Type: TC
Location: 25862 - 26605 (+)
Gene ID: Rep_1267_c_7_21
Type: pfam
Location: 26627 - 27553 (-)
Gene ID: Rep_1267_c_7_22
Type: TC
Location: 27616 - 29079 (-)
Gene ID: Rep_1267_c_7_23
Type: peptidase
Location: 29338 - 30612 (+)
Gene ID: Rep_1267_c_7_24
Type: pfam
Location: 30720 - 31586 (+)
Gene ID: Rep_1267_c_7_25
Type: CAZyme
Location: 31590 - 33356 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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