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Cluster: Rep_1267_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1267_c_5 Rep_1267_c_5_19 19478 20722 - 4.B.1.1.7
CAZyme Rep_1267_c_5 Rep_1267_c_5_20 20908 22548 + GH13_31
pfam Rep_1267_c_5 Rep_1267_c_5_21 22682 23203 + ECF-ribofla_trS | ECF_trnsprt
TC Rep_1267_c_5 Rep_1267_c_5_22 23506 24840 + 1.A.26.1.2
Gene ID: Rep_1267_c_5_19
Type: TC
Location: 19478 - 20722 (-)
Gene ID: Rep_1267_c_5_20
Type: CAZyme
Location: 20908 - 22548 (+)
Gene ID: Rep_1267_c_5_21
Type: pfam
Location: 22682 - 23203 (+)
Gene ID: Rep_1267_c_5_22
Type: TC
Location: 23506 - 24840 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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