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Cluster: Rep_1267_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1267_c_105 Rep_1267_c_105_3 1071 1772 - 3.A.11.1.3
TC Rep_1267_c_105 Rep_1267_c_105_4 1821 2414 - 2.A.115.1.5
TF Rep_1267_c_105 Rep_1267_c_105_5 2510 3133 + Crp
pfam Rep_1267_c_105 Rep_1267_c_105_6 3276 4583 + AAA_14 | DUF4143
CAZyme Rep_1267_c_105 Rep_1267_c_105_7 4695 6155 + GH1
Gene ID: Rep_1267_c_105_3
Type: TC
Location: 1071 - 1772 (-)
Gene ID: Rep_1267_c_105_4
Type: TC
Location: 1821 - 2414 (-)
Gene ID: Rep_1267_c_105_5
Type: TF
Location: 2510 - 3133 (+)
Gene ID: Rep_1267_c_105_6
Type: pfam
Location: 3276 - 4583 (+)
Gene ID: Rep_1267_c_105_7
Type: CAZyme
Location: 4695 - 6155 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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