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Cluster: Rep_1267_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1267_c_42 Rep_1267_c_42_2 392 1159 + 3.A.1.134.12
NULL(UNKNOWN) Rep_1267_c_42 Rep_1267_c_42_3 1156 2469 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_1267_c_42 Rep_1267_c_42_4 2494 2901 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1267_c_42 Rep_1267_c_42_5 2898 3827 + GT2
CAZyme Rep_1267_c_42 Rep_1267_c_42_6 3868 5568 + GH2
Gene ID: Rep_1267_c_42_2
Type: TC
Location: 392 - 1159 (+)
Gene ID: Rep_1267_c_42_3
Type:
Location: 1156 - 2469 (+)
Gene ID: Rep_1267_c_42_4
Type:
Location: 2494 - 2901 (+)
Gene ID: Rep_1267_c_42_5
Type: CAZyme
Location: 2898 - 3827 (+)
Gene ID: Rep_1267_c_42_6
Type: CAZyme
Location: 3868 - 5568 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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