Cluster: Rep_1261_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1261
- CGC Family ID: CGCFAM_00092
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1261_c_19 | Rep_1261_c_19_7 | 7206 | 8555 | + | 3.A.1.1.18 |
| TC | Rep_1261_c_19 | Rep_1261_c_19_8 | 8629 | 9510 | + | 3.A.1.1.25 |
| TC | Rep_1261_c_19 | Rep_1261_c_19_9 | 9522 | 10397 | + | 3.A.1.1.18 |
| pfam | Rep_1261_c_19 | Rep_1261_c_19_10 | 10414 | 10587 | + | DUF6903 |
| TC | Rep_1261_c_19 | Rep_1261_c_19_11 | 10600 | 11691 | + | 3.A.1.1.26 |
| pfam | Rep_1261_c_19 | Rep_1261_c_19_12 | 11703 | 13187 | + | GalP_UDP_transf | GalP_UDP_tr_C |
| CAZyme | Rep_1261_c_19 | Rep_1261_c_19_13 | 13184 | 15328 | + | GH112 |
Gene ID: Rep_1261_c_19_7
Type: TC
Location: 7206 - 8555 (+)
Type: TC
Location: 7206 - 8555 (+)
Gene ID: Rep_1261_c_19_8
Type: TC
Location: 8629 - 9510 (+)
Type: TC
Location: 8629 - 9510 (+)
Gene ID: Rep_1261_c_19_9
Type: TC
Location: 9522 - 10397 (+)
Type: TC
Location: 9522 - 10397 (+)
Gene ID: Rep_1261_c_19_10
Type: pfam
Location: 10414 - 10587 (+)
Type: pfam
Location: 10414 - 10587 (+)
Gene ID: Rep_1261_c_19_11
Type: TC
Location: 10600 - 11691 (+)
Type: TC
Location: 10600 - 11691 (+)
Gene ID: Rep_1261_c_19_12
Type: pfam
Location: 11703 - 13187 (+)
Type: pfam
Location: 11703 - 13187 (+)
Gene ID: Rep_1261_c_19_13
Type: CAZyme
Location: 13184 - 15328 (+)
Type: CAZyme
Location: 13184 - 15328 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalicoccus
Species
Faecalicoccus sp902497095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.