Cluster: Rep_1261_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1261
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1261_c_6 | Rep_1261_c_6_19 | 19409 | 20566 | + | 2.A.86.1.8 |
| TC | Rep_1261_c_6 | Rep_1261_c_6_20 | 20638 | 21534 | + | 2.A.119.2.1 |
| CAZyme | Rep_1261_c_6 | Rep_1261_c_6_21 | 21755 | 24559 | + | GH101 |
| CAZyme | Rep_1261_c_6 | Rep_1261_c_6_22 | 24623 | 28207 | + | CBM32 |
| pfam | Rep_1261_c_6 | Rep_1261_c_6_23 | 28267 | 29841 | - | GDPD | GPDPase_memb |
| NULL(UNKNOWN) | Rep_1261_c_6 | Rep_1261_c_6_24 | 29838 | 30050 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1261_c_6 | Rep_1261_c_6_25 | 30639 | 32999 | + | 3.A.11.3.1 |
Gene ID: Rep_1261_c_6_19
Type: TC
Location: 19409 - 20566 (+)
Type: TC
Location: 19409 - 20566 (+)
Gene ID: Rep_1261_c_6_20
Type: TC
Location: 20638 - 21534 (+)
Type: TC
Location: 20638 - 21534 (+)
Gene ID: Rep_1261_c_6_21
Type: CAZyme
Location: 21755 - 24559 (+)
Type: CAZyme
Location: 21755 - 24559 (+)
Gene ID: Rep_1261_c_6_22
Type: CAZyme
Location: 24623 - 28207 (+)
Type: CAZyme
Location: 24623 - 28207 (+)
Gene ID: Rep_1261_c_6_23
Type: pfam
Location: 28267 - 29841 (-)
Type: pfam
Location: 28267 - 29841 (-)
Gene ID: Rep_1261_c_6_24
Type:
Location: 29838 - 30050 (-)
Type:
Location: 29838 - 30050 (-)
Gene ID: Rep_1261_c_6_25
Type: TC
Location: 30639 - 32999 (+)
Type: TC
Location: 30639 - 32999 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalicoccus
Species
Faecalicoccus sp902497095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.