Cluster: Rep_1258_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1258
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1258_c_16 | Rep_1258_c_16_18 | 17040 | 18218 | - | 2.A.86.1.8 |
| pfam | Rep_1258_c_16 | Rep_1258_c_16_19 | 18352 | 20439 | + | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| CAZyme | Rep_1258_c_16 | Rep_1258_c_16_20 | 20468 | 21760 | - | GH13_20 |
| pfam | Rep_1258_c_16 | Rep_1258_c_16_21 | 21814 | 22290 | - | tRNA_edit |
| TC | Rep_1258_c_16 | Rep_1258_c_16_22 | 22591 | 25218 | - | 8.A.7.1.5 |
Gene ID: Rep_1258_c_16_18
Type: TC
Location: 17040 - 18218 (-)
Type: TC
Location: 17040 - 18218 (-)
Gene ID: Rep_1258_c_16_19
Type: pfam
Location: 18352 - 20439 (+)
Type: pfam
Location: 18352 - 20439 (+)
Gene ID: Rep_1258_c_16_20
Type: CAZyme
Location: 20468 - 21760 (-)
Type: CAZyme
Location: 20468 - 21760 (-)
Gene ID: Rep_1258_c_16_21
Type: pfam
Location: 21814 - 22290 (-)
Type: pfam
Location: 21814 - 22290 (-)
Gene ID: Rep_1258_c_16_22
Type: TC
Location: 22591 - 25218 (-)
Type: TC
Location: 22591 - 25218 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalitalea
Species
Faecalitalea cylindroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.