Cluster: Rep_1258_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1258
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1258_c_2 | Rep_1258_c_2_23 | 23941 | 24513 | + | 4.A.3.2.2 |
| TC | Rep_1258_c_2 | Rep_1258_c_2_24 | 24535 | 24870 | + | 4.A.3.2.2 |
| CAZyme | Rep_1258_c_2 | Rep_1258_c_2_25 | 24929 | 26377 | + | GH1 |
| TC | Rep_1258_c_2 | Rep_1258_c_2_26 | 26374 | 26985 | + | 2.A.115.2.3 |
| pfam | Rep_1258_c_2 | Rep_1258_c_2_27 | 27009 | 27845 | + | S6PP | S6PP | Hydrolase_3 |
| CAZyme | Rep_1258_c_2 | Rep_1258_c_2_28 | 27978 | 29288 | + | GH1 |
Gene ID: Rep_1258_c_2_23
Type: TC
Location: 23941 - 24513 (+)
Type: TC
Location: 23941 - 24513 (+)
Gene ID: Rep_1258_c_2_24
Type: TC
Location: 24535 - 24870 (+)
Type: TC
Location: 24535 - 24870 (+)
Gene ID: Rep_1258_c_2_25
Type: CAZyme
Location: 24929 - 26377 (+)
Type: CAZyme
Location: 24929 - 26377 (+)
Gene ID: Rep_1258_c_2_26
Type: TC
Location: 26374 - 26985 (+)
Type: TC
Location: 26374 - 26985 (+)
Gene ID: Rep_1258_c_2_27
Type: pfam
Location: 27009 - 27845 (+)
Type: pfam
Location: 27009 - 27845 (+)
Gene ID: Rep_1258_c_2_28
Type: CAZyme
Location: 27978 - 29288 (+)
Type: CAZyme
Location: 27978 - 29288 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalitalea
Species
Faecalitalea cylindroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.