Cluster: Rep_1258_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1258
- CGC Family ID: CGCFAM_01749
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1258_c_0 | Rep_1258_c_0_124 | 121863 | 124487 | + | 3.A.1.122.13 |
| pfam | Rep_1258_c_0 | Rep_1258_c_0_125 | 124631 | 125770 | + | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_1258_c_0 | Rep_1258_c_0_126 | 125775 | 126896 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_1258_c_0 | Rep_1258_c_0_127 | 126896 | 128338 | + | GT5 |
| pfam | Rep_1258_c_0 | Rep_1258_c_0_128 | 128339 | 128746 | + | 2-thiour_desulf |
| TC | Rep_1258_c_0 | Rep_1258_c_0_129 | 128825 | 129091 | + | 8.A.8.1.3 |
Gene ID: Rep_1258_c_0_124
Type: TC
Location: 121863 - 124487 (+)
Type: TC
Location: 121863 - 124487 (+)
Gene ID: Rep_1258_c_0_125
Type: pfam
Location: 124631 - 125770 (+)
Type: pfam
Location: 124631 - 125770 (+)
Gene ID: Rep_1258_c_0_126
Type: pfam
Location: 125775 - 126896 (+)
Type: pfam
Location: 125775 - 126896 (+)
Gene ID: Rep_1258_c_0_127
Type: CAZyme
Location: 126896 - 128338 (+)
Type: CAZyme
Location: 126896 - 128338 (+)
Gene ID: Rep_1258_c_0_128
Type: pfam
Location: 128339 - 128746 (+)
Type: pfam
Location: 128339 - 128746 (+)
Gene ID: Rep_1258_c_0_129
Type: TC
Location: 128825 - 129091 (+)
Type: TC
Location: 128825 - 129091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalitalea
Species
Faecalitalea cylindroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.