Cluster: Rep_1258_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1258
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1258_c_0 | Rep_1258_c_0_55 | 52899 | 53780 | + | 3.A.1.1.25 |
| TC | Rep_1258_c_0 | Rep_1258_c_0_56 | 53792 | 54652 | + | 3.A.1.1.18 |
| pfam | Rep_1258_c_0 | Rep_1258_c_0_57 | 54665 | 54838 | + | DUF6903 |
| TC | Rep_1258_c_0 | Rep_1258_c_0_58 | 54850 | 55941 | + | 3.A.1.1.26 |
| CAZyme | Rep_1258_c_0 | Rep_1258_c_0_59 | 55958 | 58102 | + | GH112 |
Gene ID: Rep_1258_c_0_55
Type: TC
Location: 52899 - 53780 (+)
Type: TC
Location: 52899 - 53780 (+)
Gene ID: Rep_1258_c_0_56
Type: TC
Location: 53792 - 54652 (+)
Type: TC
Location: 53792 - 54652 (+)
Gene ID: Rep_1258_c_0_57
Type: pfam
Location: 54665 - 54838 (+)
Type: pfam
Location: 54665 - 54838 (+)
Gene ID: Rep_1258_c_0_58
Type: TC
Location: 54850 - 55941 (+)
Type: TC
Location: 54850 - 55941 (+)
Gene ID: Rep_1258_c_0_59
Type: CAZyme
Location: 55958 - 58102 (+)
Type: CAZyme
Location: 55958 - 58102 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalitalea
Species
Faecalitalea cylindroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1258_c_0_55 | vegetarian > omnivore | 4.93848 | 0.04105 |
| Rep_1258_c_0_57 | vegetarian > omnivore | 2.11309 | 0.04105 |