Cluster: Rep_1238_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1238
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1238_c_63 | Rep_1238_c_63_1 | 111 | 1544 | + | GH1 |
| CAZyme | Rep_1238_c_63 | Rep_1238_c_63_2 | 1792 | 6042 | + | GH16_6 | GH16_6 |
| TC | Rep_1238_c_63 | Rep_1238_c_63_3 | 6366 | 7862 | + | 2.A.35.2.1 |
| NULL(UNKNOWN) | Rep_1238_c_63 | Rep_1238_c_63_4 | 7914 | 8588 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1238_c_63 | Rep_1238_c_63_5 | 8755 | 9678 | + | 2.A.69.4.2 |
Gene ID: Rep_1238_c_63_1
Type: CAZyme
Location: 111 - 1544 (+)
Type: CAZyme
Location: 111 - 1544 (+)
Gene ID: Rep_1238_c_63_2
Type: CAZyme
Location: 1792 - 6042 (+)
Type: CAZyme
Location: 1792 - 6042 (+)
Gene ID: Rep_1238_c_63_3
Type: TC
Location: 6366 - 7862 (+)
Type: TC
Location: 6366 - 7862 (+)
Gene ID: Rep_1238_c_63_4
Type:
Location: 7914 - 8588 (+)
Type:
Location: 7914 - 8588 (+)
Gene ID: Rep_1238_c_63_5
Type: TC
Location: 8755 - 9678 (+)
Type: TC
Location: 8755 - 9678 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1238_c_63_4 | vegan > omnivore | 2.42726 | 0.00574 |
| Rep_1238_c_63_5 | vegan > omnivore | 1.92084 | 0.00574 |