Cluster: Rep_1238_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1238
- CGC Family ID: CGCFAM_02068
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1238_c_36 | Rep_1238_c_36_3 | 1262 | 2695 | + | 4.A.1.1.2 |
| pfam | Rep_1238_c_36 | Rep_1238_c_36_4 | 2708 | 3538 | + | PRD | PRD | CAT_RBD |
| NULL(UNKNOWN) | Rep_1238_c_36 | Rep_1238_c_36_5 | 3840 | 4313 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1238_c_36 | Rep_1238_c_36_6 | 5120 | 10765 | + | GH84 |
| TC | Rep_1238_c_36 | Rep_1238_c_36_7 | 10964 | 11917 | + | 3.A.1.2.21 |
Gene ID: Rep_1238_c_36_3
Type: TC
Location: 1262 - 2695 (+)
Type: TC
Location: 1262 - 2695 (+)
Gene ID: Rep_1238_c_36_4
Type: pfam
Location: 2708 - 3538 (+)
Type: pfam
Location: 2708 - 3538 (+)
Gene ID: Rep_1238_c_36_5
Type:
Location: 3840 - 4313 (+)
Type:
Location: 3840 - 4313 (+)
Gene ID: Rep_1238_c_36_6
Type: CAZyme
Location: 5120 - 10765 (+)
Type: CAZyme
Location: 5120 - 10765 (+)
Gene ID: Rep_1238_c_36_7
Type: TC
Location: 10964 - 11917 (+)
Type: TC
Location: 10964 - 11917 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1238_c_36_5 | vegan > omnivore | 6.80499 | 0.00574 |