Cluster: Rep_1238_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: Rep_1238
- CGC Family ID: CGCFAM_00020
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1238_c_264 | Rep_1238_c_264_5 | 4345 | 4803 | + | 4.A.1.1.9 |
| pfam | Rep_1238_c_264 | Rep_1238_c_264_6 | 4888 | 5715 | + | PRD | PRD | CAT_RBD |
| TC | Rep_1238_c_264 | Rep_1238_c_264_7 | 5862 | 7283 | + | 4.A.1.2.11 |
| CAZyme | Rep_1238_c_264 | Rep_1238_c_264_8 | 7342 | 8622 | + | GH140 |
| CAZyme | Rep_1238_c_264 | Rep_1238_c_264_9 | 8615 | 10084 | + | GH1 |
Gene ID: Rep_1238_c_264_5
Type: TC
Location: 4345 - 4803 (+)
Type: TC
Location: 4345 - 4803 (+)
Gene ID: Rep_1238_c_264_6
Type: pfam
Location: 4888 - 5715 (+)
Type: pfam
Location: 4888 - 5715 (+)
Gene ID: Rep_1238_c_264_7
Type: TC
Location: 5862 - 7283 (+)
Type: TC
Location: 5862 - 7283 (+)
Gene ID: Rep_1238_c_264_8
Type: CAZyme
Location: 7342 - 8622 (+)
Type: CAZyme
Location: 7342 - 8622 (+)
Gene ID: Rep_1238_c_264_9
Type: CAZyme
Location: 8615 - 10084 (+)
Type: CAZyme
Location: 8615 - 10084 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.