Cluster: Rep_1238_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1238
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1238_c_223 | Rep_1238_c_223_12 | 10849 | 11856 | + | GH25 |
| pfam | Rep_1238_c_223 | Rep_1238_c_223_13 | 11867 | 12361 | - | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| TC | Rep_1238_c_223 | Rep_1238_c_223_14 | 12485 | 12712 | + | 3.D.1.6.3 |
| TC | Rep_1238_c_223 | Rep_1238_c_223_15 | 12740 | 13219 | - | 2.A.88.9.2 |
Gene ID: Rep_1238_c_223_12
Type: CAZyme
Location: 10849 - 11856 (+)
Type: CAZyme
Location: 10849 - 11856 (+)
Gene ID: Rep_1238_c_223_13
Type: pfam
Location: 11867 - 12361 (-)
Type: pfam
Location: 11867 - 12361 (-)
Gene ID: Rep_1238_c_223_14
Type: TC
Location: 12485 - 12712 (+)
Type: TC
Location: 12485 - 12712 (+)
Gene ID: Rep_1238_c_223_15
Type: TC
Location: 12740 - 13219 (-)
Type: TC
Location: 12740 - 13219 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1238_c_223_14 | vegan > omnivore | 5.70861 | 0.00574 |
| Rep_1238_c_223_15 | vegan > omnivore | 1.68709 | 0.00574 |