Cluster: Rep_1238_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: Rep_1238
- CGC Family ID: CGCFAM_02283
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1238_c_180 | Rep_1238_c_180_2 | 2194 | 2538 | + | 4.A.3.2.2 |
| TC | Rep_1238_c_180 | Rep_1238_c_180_3 | 2535 | 2840 | + | 4.A.3.2.2 |
| TC | Rep_1238_c_180 | Rep_1238_c_180_4 | 2846 | 4135 | + | 4.A.3.2.8 |
| pfam | Rep_1238_c_180 | Rep_1238_c_180_5 | 4145 | 4930 | + | YdjC |
| CAZyme | Rep_1238_c_180 | Rep_1238_c_180_6 | 4917 | 6017 | + | GH5_44 |
Gene ID: Rep_1238_c_180_2
Type: TC
Location: 2194 - 2538 (+)
Type: TC
Location: 2194 - 2538 (+)
Gene ID: Rep_1238_c_180_3
Type: TC
Location: 2535 - 2840 (+)
Type: TC
Location: 2535 - 2840 (+)
Gene ID: Rep_1238_c_180_4
Type: TC
Location: 2846 - 4135 (+)
Type: TC
Location: 2846 - 4135 (+)
Gene ID: Rep_1238_c_180_5
Type: pfam
Location: 4145 - 4930 (+)
Type: pfam
Location: 4145 - 4930 (+)
Gene ID: Rep_1238_c_180_6
Type: CAZyme
Location: 4917 - 6017 (+)
Type: CAZyme
Location: 4917 - 6017 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.