Cluster: Rep_1238_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1238
- CGC Family ID: CGCFAM_00029
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1238_c_7 | Rep_1238_c_7_1 | 200 | 2083 | + | 9.B.18.2.1 |
| pfam | Rep_1238_c_7 | Rep_1238_c_7_2 | 2203 | 2721 | + | KOW | NusG |
| pfam | Rep_1238_c_7 | Rep_1238_c_7_3 | 2776 | 3984 | + | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| TC | Rep_1238_c_7 | Rep_1238_c_7_4 | 3975 | 4661 | + | 9.B.18.1.3 |
| CAZyme | Rep_1238_c_7 | Rep_1238_c_7_5 | 4640 | 5143 | + | GT2 |
Gene ID: Rep_1238_c_7_1
Type: TC
Location: 200 - 2083 (+)
Type: TC
Location: 200 - 2083 (+)
Gene ID: Rep_1238_c_7_2
Type: pfam
Location: 2203 - 2721 (+)
Type: pfam
Location: 2203 - 2721 (+)
Gene ID: Rep_1238_c_7_3
Type: pfam
Location: 2776 - 3984 (+)
Type: pfam
Location: 2776 - 3984 (+)
Gene ID: Rep_1238_c_7_4
Type: TC
Location: 3975 - 4661 (+)
Type: TC
Location: 3975 - 4661 (+)
Gene ID: Rep_1238_c_7_5
Type: CAZyme
Location: 4640 - 5143 (+)
Type: CAZyme
Location: 4640 - 5143 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.