Cluster: Rep_1219_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1219
- CGC Family ID: CGCFAM_00489
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1219_c_5 | Rep_1219_c_5_86 | 83755 | 84885 | + | GT4 |
| CAZyme | Rep_1219_c_5 | Rep_1219_c_5_87 | 84893 | 85798 | + | GT2 |
| TC | Rep_1219_c_5 | Rep_1219_c_5_88 | 85813 | 87528 | + | 3.A.1.106.2 |
| TC | Rep_1219_c_5 | Rep_1219_c_5_89 | 87595 | 88683 | + | 9.B.146.1.1 |
| NULL(UNKNOWN) | Rep_1219_c_5 | Rep_1219_c_5_90 | 89383 | 89964 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_1219_c_5 | Rep_1219_c_5_91 | 90000 | 90590 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1219_c_5 | Rep_1219_c_5_92 | 90607 | 91605 | + | GT4 |
Gene ID: Rep_1219_c_5_86
Type: CAZyme
Location: 83755 - 84885 (+)
Type: CAZyme
Location: 83755 - 84885 (+)
Gene ID: Rep_1219_c_5_87
Type: CAZyme
Location: 84893 - 85798 (+)
Type: CAZyme
Location: 84893 - 85798 (+)
Gene ID: Rep_1219_c_5_88
Type: TC
Location: 85813 - 87528 (+)
Type: TC
Location: 85813 - 87528 (+)
Gene ID: Rep_1219_c_5_89
Type: TC
Location: 87595 - 88683 (+)
Type: TC
Location: 87595 - 88683 (+)
Gene ID: Rep_1219_c_5_90
Type:
Location: 89383 - 89964 (+)
Type:
Location: 89383 - 89964 (+)
Gene ID: Rep_1219_c_5_91
Type:
Location: 90000 - 90590 (+)
Type:
Location: 90000 - 90590 (+)
Gene ID: Rep_1219_c_5_92
Type: CAZyme
Location: 90607 - 91605 (+)
Type: CAZyme
Location: 90607 - 91605 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Aphodocola
Species
Aphodocola sp900759985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.