Cluster: Rep_1219_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1219
- CGC Family ID: CGCFAM_00073
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1219_c_5 | Rep_1219_c_5_37 | 30942 | 32384 | + | 2.A.118.1.1 |
| CAZyme | Rep_1219_c_5 | Rep_1219_c_5_38 | 32476 | 34782 | + | GT4 |
| CAZyme | Rep_1219_c_5 | Rep_1219_c_5_39 | 34775 | 35713 | + | GT2 |
| CAZyme | Rep_1219_c_5 | Rep_1219_c_5_40 | 35710 | 36669 | + | GT2 |
| TC | Rep_1219_c_5 | Rep_1219_c_5_41 | 36766 | 37578 | + | 3.A.1.103.6 |
| TC | Rep_1219_c_5 | Rep_1219_c_5_42 | 37590 | 38333 | + | 3.A.1.103.5 |
| CAZyme | Rep_1219_c_5 | Rep_1219_c_5_43 | 38342 | 40135 | + | GT32 |
Gene ID: Rep_1219_c_5_37
Type: TC
Location: 30942 - 32384 (+)
Type: TC
Location: 30942 - 32384 (+)
Gene ID: Rep_1219_c_5_38
Type: CAZyme
Location: 32476 - 34782 (+)
Type: CAZyme
Location: 32476 - 34782 (+)
Gene ID: Rep_1219_c_5_39
Type: CAZyme
Location: 34775 - 35713 (+)
Type: CAZyme
Location: 34775 - 35713 (+)
Gene ID: Rep_1219_c_5_40
Type: CAZyme
Location: 35710 - 36669 (+)
Type: CAZyme
Location: 35710 - 36669 (+)
Gene ID: Rep_1219_c_5_41
Type: TC
Location: 36766 - 37578 (+)
Type: TC
Location: 36766 - 37578 (+)
Gene ID: Rep_1219_c_5_42
Type: TC
Location: 37590 - 38333 (+)
Type: TC
Location: 37590 - 38333 (+)
Gene ID: Rep_1219_c_5_43
Type: CAZyme
Location: 38342 - 40135 (+)
Type: CAZyme
Location: 38342 - 40135 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Aphodocola
Species
Aphodocola sp900759985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.