Cluster: Rep_1219_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1219
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1219_c_2 | Rep_1219_c_2_83 | 79284 | 80903 | + | 2.A.66.2.14 |
| NULL(UNKNOWN) | Rep_1219_c_2 | Rep_1219_c_2_84 | 80924 | 81250 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1219_c_2 | Rep_1219_c_2_85 | 81323 | 81964 | + | Methyltransf_4 | Methyltransf_31 |
| CAZyme | Rep_1219_c_2 | Rep_1219_c_2_86 | 81980 | 83197 | + | GH25 |
Gene ID: Rep_1219_c_2_83
Type: TC
Location: 79284 - 80903 (+)
Type: TC
Location: 79284 - 80903 (+)
Gene ID: Rep_1219_c_2_84
Type:
Location: 80924 - 81250 (-)
Type:
Location: 80924 - 81250 (-)
Gene ID: Rep_1219_c_2_85
Type: pfam
Location: 81323 - 81964 (+)
Type: pfam
Location: 81323 - 81964 (+)
Gene ID: Rep_1219_c_2_86
Type: CAZyme
Location: 81980 - 83197 (+)
Type: CAZyme
Location: 81980 - 83197 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Aphodocola
Species
Aphodocola sp900759985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.