Cluster: Rep_1219_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1219
- CGC Family ID: CGCFAM_02987
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1219_c_0 | Rep_1219_c_0_97 | 89639 | 90730 | - | GT2 |
| pfam | Rep_1219_c_0 | Rep_1219_c_0_98 | 90818 | 91792 | - | Collagen | Collagen | Collagen | Collagen |
| TC | Rep_1219_c_0 | Rep_1219_c_0_99 | 91911 | 92765 | + | 2.A.119.2.1 |
Gene ID: Rep_1219_c_0_97
Type: CAZyme
Location: 89639 - 90730 (-)
Type: CAZyme
Location: 89639 - 90730 (-)
Gene ID: Rep_1219_c_0_98
Type: pfam
Location: 90818 - 91792 (-)
Type: pfam
Location: 90818 - 91792 (-)
Gene ID: Rep_1219_c_0_99
Type: TC
Location: 91911 - 92765 (+)
Type: TC
Location: 91911 - 92765 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Aphodocola
Species
Aphodocola sp900759985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.