Cluster: Rep_1205_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: Rep_1205
- CGC Family ID: CGCFAM_00037
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1205_c_19 | Rep_1205_c_19_10 | 11425 | 13110 | + | CBM34 | GH13_20 |
| STP | Rep_1205_c_19 | Rep_1205_c_19_11 | 13115 | 14602 | + | SBP_bac_1 |
| TC | Rep_1205_c_19 | Rep_1205_c_19_12 | 14609 | 16054 | + | 3.A.1.1.27 |
| TC | Rep_1205_c_19 | Rep_1205_c_19_13 | 16051 | 16884 | + | 3.A.1.1.27 |
| TC | Rep_1205_c_19 | Rep_1205_c_19_14 | 16889 | 18517 | + | 3.A.1.1.22 |
| CAZyme | Rep_1205_c_19 | Rep_1205_c_19_15 | 18598 | 20304 | + | CBM34 | GH13_20 |
| TC | Rep_1205_c_19 | Rep_1205_c_19_16 | 20313 | 21671 | - | 2.A.66.1.32 |
Gene ID: Rep_1205_c_19_10
Type: CAZyme
Location: 11425 - 13110 (+)
Type: CAZyme
Location: 11425 - 13110 (+)
Gene ID: Rep_1205_c_19_11
Type: STP
Location: 13115 - 14602 (+)
Type: STP
Location: 13115 - 14602 (+)
Gene ID: Rep_1205_c_19_12
Type: TC
Location: 14609 - 16054 (+)
Type: TC
Location: 14609 - 16054 (+)
Gene ID: Rep_1205_c_19_13
Type: TC
Location: 16051 - 16884 (+)
Type: TC
Location: 16051 - 16884 (+)
Gene ID: Rep_1205_c_19_14
Type: TC
Location: 16889 - 18517 (+)
Type: TC
Location: 16889 - 18517 (+)
Gene ID: Rep_1205_c_19_15
Type: CAZyme
Location: 18598 - 20304 (+)
Type: CAZyme
Location: 18598 - 20304 (+)
Gene ID: Rep_1205_c_19_16
Type: TC
Location: 20313 - 21671 (-)
Type: TC
Location: 20313 - 21671 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Species
UBA4951 sp944358895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.