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Cluster: Rep_1201_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1201_c_27 Rep_1201_c_27_62 70386 71036 - 3.A.3.1.8
TC Rep_1201_c_27 Rep_1201_c_27_63 71033 73933 - 3.A.3.1.8
CAZyme Rep_1201_c_27 Rep_1201_c_27_64 74016 75719 - CBM34 | GH13_20
TC Rep_1201_c_27 Rep_1201_c_27_65 75868 77601 - 3.A.1.1.26
TC Rep_1201_c_27 Rep_1201_c_27_66 77608 78468 - 3.A.1.1.27
TC Rep_1201_c_27 Rep_1201_c_27_67 78465 79817 - 3.A.1.1.27
pfam Rep_1201_c_27 Rep_1201_c_27_68 79833 81320 - SBP_bac_1 | SBP_bac_8
CAZyme Rep_1201_c_27 Rep_1201_c_27_69 81307 83028 - CBM34 | GH13_20
Gene ID: Rep_1201_c_27_62
Type: TC
Location: 70386 - 71036 (-)
Gene ID: Rep_1201_c_27_63
Type: TC
Location: 71033 - 73933 (-)
Gene ID: Rep_1201_c_27_64
Type: CAZyme
Location: 74016 - 75719 (-)
Gene ID: Rep_1201_c_27_65
Type: TC
Location: 75868 - 77601 (-)
Gene ID: Rep_1201_c_27_66
Type: TC
Location: 77608 - 78468 (-)
Gene ID: Rep_1201_c_27_67
Type: TC
Location: 78465 - 79817 (-)
Gene ID: Rep_1201_c_27_68
Type: pfam
Location: 79833 - 81320 (-)
Gene ID: Rep_1201_c_27_69
Type: CAZyme
Location: 81307 - 83028 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
CALVUG01
→
Species
CALVUG01 sp944351395

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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