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Cluster: Rep_1199_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1199_c_247 Rep_1199_c_247_1 1 1800 + 3.A.1.1.27
TC Rep_1199_c_247 Rep_1199_c_247_2 1797 2726 + 3.A.1.1.27
CAZyme Rep_1199_c_247 Rep_1199_c_247_3 2729 4345 + GH13_36
CAZyme Rep_1199_c_247 Rep_1199_c_247_4 4350 7043 + CBM41 | GH13_14
Gene ID: Rep_1199_c_247_1
Type: TC
Location: 1 - 1800 (+)
Gene ID: Rep_1199_c_247_2
Type: TC
Location: 1797 - 2726 (+)
Gene ID: Rep_1199_c_247_3
Type: CAZyme
Location: 2729 - 4345 (+)
Gene ID: Rep_1199_c_247_4
Type: CAZyme
Location: 4350 - 7043 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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