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Cluster: Rep_1199_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1199_c_100 Rep_1199_c_100_5 3261 7517 + CBM67
STP Rep_1199_c_100 Rep_1199_c_100_6 7533 8891 + SBP_bac_1
TC Rep_1199_c_100 Rep_1199_c_100_7 8902 9831 + 3.A.1.1.34
TC Rep_1199_c_100 Rep_1199_c_100_8 9828 10709 + 3.A.1.1.18
Gene ID: Rep_1199_c_100_5
Type: CAZyme
Location: 3261 - 7517 (+)
Gene ID: Rep_1199_c_100_6
Type: STP
Location: 7533 - 8891 (+)
Gene ID: Rep_1199_c_100_7
Type: TC
Location: 8902 - 9831 (+)
Gene ID: Rep_1199_c_100_8
Type: TC
Location: 9828 - 10709 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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