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Cluster: Rep_1193_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1193_c_6 Rep_1193_c_6_79 57428 58204 + 3.A.7.14.1
TC Rep_1193_c_6 Rep_1193_c_6_80 58507 59892 - 2.A.35.1.2
pfam Rep_1193_c_6 Rep_1193_c_6_81 59949 61019 - Octopine_DH
TC Rep_1193_c_6 Rep_1193_c_6_82 61541 62491 + 3.A.7.14.1
TC Rep_1193_c_6 Rep_1193_c_6_83 62696 63025 + 2.A.7.1.5
TC Rep_1193_c_6 Rep_1193_c_6_84 63027 63341 + 2.A.7.1.5
pfam Rep_1193_c_6 Rep_1193_c_6_85 63421 64380 + 2-Hacid_dh | 2-Hacid_dh_C
STP Rep_1193_c_6 Rep_1193_c_6_86 64437 65561 - Pyr_redox
CAZyme Rep_1193_c_6 Rep_1193_c_6_87 65582 66373 - GH73
NULL(UNKNOWN) Rep_1193_c_6 Rep_1193_c_6_88 66397 66675 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1193_c_6 Rep_1193_c_6_89 66784 67251 - DUF1641
TC Rep_1193_c_6 Rep_1193_c_6_90 67253 70204 - 3.D.1.9.2
Gene ID: Rep_1193_c_6_79
Type: TC
Location: 57428 - 58204 (+)
Gene ID: Rep_1193_c_6_80
Type: TC
Location: 58507 - 59892 (-)
Gene ID: Rep_1193_c_6_81
Type: pfam
Location: 59949 - 61019 (-)
Gene ID: Rep_1193_c_6_82
Type: TC
Location: 61541 - 62491 (+)
Gene ID: Rep_1193_c_6_83
Type: TC
Location: 62696 - 63025 (+)
Gene ID: Rep_1193_c_6_84
Type: TC
Location: 63027 - 63341 (+)
Gene ID: Rep_1193_c_6_85
Type: pfam
Location: 63421 - 64380 (+)
Gene ID: Rep_1193_c_6_86
Type: STP
Location: 64437 - 65561 (-)
Gene ID: Rep_1193_c_6_87
Type: CAZyme
Location: 65582 - 66373 (-)
Gene ID: Rep_1193_c_6_88
Type:
Location: 66397 - 66675 (-)
Gene ID: Rep_1193_c_6_89
Type: pfam
Location: 66784 - 67251 (-)
Gene ID: Rep_1193_c_6_90
Type: TC
Location: 67253 - 70204 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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