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Cluster: Rep_1193_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1193_c_4 Rep_1193_c_4_28 27997 28872 + 2.A.102.4.8
pfam Rep_1193_c_4 Rep_1193_c_4_29 28918 30096 + ATP-sulfurylase | PUA_2
sulfatase Rep_1193_c_4 Rep_1193_c_4_30 30115 30714 + S1_11
TC Rep_1193_c_4 Rep_1193_c_4_31 31141 31902 + 3.A.7.14.1
NULL(UNKNOWN) Rep_1193_c_4 Rep_1193_c_4_32 32123 32365 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1193_c_4 Rep_1193_c_4_33 32531 33823 + 2.A.13.1.1
TC Rep_1193_c_4 Rep_1193_c_4_34 34235 34657 + 2.A.15.2.3
TC Rep_1193_c_4 Rep_1193_c_4_35 34694 35857 + 2.A.15.2.3
TF Rep_1193_c_4 Rep_1193_c_4_36 35951 36505 - 0040266
sulfatase Rep_1193_c_4 Rep_1193_c_4_37 36745 38235 + S1_6
CAZyme Rep_1193_c_4 Rep_1193_c_4_38 38372 40078 + AA3_2
Gene ID: Rep_1193_c_4_28
Type: TC
Location: 27997 - 28872 (+)
Gene ID: Rep_1193_c_4_29
Type: pfam
Location: 28918 - 30096 (+)
Gene ID: Rep_1193_c_4_30
Type: sulfatase
Location: 30115 - 30714 (+)
Gene ID: Rep_1193_c_4_31
Type: TC
Location: 31141 - 31902 (+)
Gene ID: Rep_1193_c_4_32
Type:
Location: 32123 - 32365 (+)
Gene ID: Rep_1193_c_4_33
Type: TC
Location: 32531 - 33823 (+)
Gene ID: Rep_1193_c_4_34
Type: TC
Location: 34235 - 34657 (+)
Gene ID: Rep_1193_c_4_35
Type: TC
Location: 34694 - 35857 (+)
Gene ID: Rep_1193_c_4_36
Type: TF
Location: 35951 - 36505 (-)
Gene ID: Rep_1193_c_4_37
Type: sulfatase
Location: 36745 - 38235 (+)
Gene ID: Rep_1193_c_4_38
Type: CAZyme
Location: 38372 - 40078 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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