Cluster: Rep_1193_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1193
- CGC Family ID: CGCFAM_08405
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1193_c_15 | Rep_1193_c_15_19 | 20421 | 21443 | + | 3.A.1.24.1 |
| TC | Rep_1193_c_15 | Rep_1193_c_15_20 | 21444 | 22103 | + | 3.A.1.24.5 |
| TC | Rep_1193_c_15 | Rep_1193_c_15_21 | 22145 | 22987 | + | 3.A.1.24.3 |
| CAZyme | Rep_1193_c_15 | Rep_1193_c_15_22 | 23464 | 24453 | + | CBM50 | CBM50 | CBM50 |
| NULL(UNKNOWN) | Rep_1193_c_15 | Rep_1193_c_15_23 | 24683 | 24961 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_1193_c_15 | Rep_1193_c_15_24 | 25112 | 25495 | + | NUDIX |
| TC | Rep_1193_c_15 | Rep_1193_c_15_25 | 25562 | 26368 | - | 9.B.141.1.2 |
Gene ID: Rep_1193_c_15_19
Type: TC
Location: 20421 - 21443 (+)
Type: TC
Location: 20421 - 21443 (+)
Gene ID: Rep_1193_c_15_20
Type: TC
Location: 21444 - 22103 (+)
Type: TC
Location: 21444 - 22103 (+)
Gene ID: Rep_1193_c_15_21
Type: TC
Location: 22145 - 22987 (+)
Type: TC
Location: 22145 - 22987 (+)
Gene ID: Rep_1193_c_15_22
Type: CAZyme
Location: 23464 - 24453 (+)
Type: CAZyme
Location: 23464 - 24453 (+)
Gene ID: Rep_1193_c_15_23
Type:
Location: 24683 - 24961 (-)
Type:
Location: 24683 - 24961 (-)
Gene ID: Rep_1193_c_15_24
Type: STP
Location: 25112 - 25495 (+)
Type: STP
Location: 25112 - 25495 (+)
Gene ID: Rep_1193_c_15_25
Type: TC
Location: 25562 - 26368 (-)
Type: TC
Location: 25562 - 26368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Staphylococcaceae
Genus
Staphylococcus
Species
Staphylococcus hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.