Cluster: Rep_1193_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1193
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1193_c_11 | Rep_1193_c_11_47 | 50109 | 51308 | - | 9.B.10.1.1 |
| TC | Rep_1193_c_11 | Rep_1193_c_11_48 | 51602 | 52963 | - | 2.A.2.6.2 |
| CAZyme | Rep_1193_c_11 | Rep_1193_c_11_49 | 53381 | 54787 | + | GT2 |
| TF | Rep_1193_c_11 | Rep_1193_c_11_50 | 55091 | 55291 | + | CSD |
| TC | Rep_1193_c_11 | Rep_1193_c_11_51 | 55433 | 55924 | - | 9.A.24.1.7 |
Gene ID: Rep_1193_c_11_47
Type: TC
Location: 50109 - 51308 (-)
Type: TC
Location: 50109 - 51308 (-)
Gene ID: Rep_1193_c_11_48
Type: TC
Location: 51602 - 52963 (-)
Type: TC
Location: 51602 - 52963 (-)
Gene ID: Rep_1193_c_11_49
Type: CAZyme
Location: 53381 - 54787 (+)
Type: CAZyme
Location: 53381 - 54787 (+)
Gene ID: Rep_1193_c_11_50
Type: TF
Location: 55091 - 55291 (+)
Type: TF
Location: 55091 - 55291 (+)
Gene ID: Rep_1193_c_11_51
Type: TC
Location: 55433 - 55924 (-)
Type: TC
Location: 55433 - 55924 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Staphylococcaceae
Genus
Staphylococcus
Species
Staphylococcus hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.