Cluster: Rep_1191_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1191
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1191_c_47 | Rep_1191_c_47_23 | 22076 | 22885 | - | 1.C.109.1.5 |
| CAZyme | Rep_1191_c_47 | Rep_1191_c_47_24 | 23114 | 25507 | - | GT35 |
| CAZyme | Rep_1191_c_47 | Rep_1191_c_47_25 | 25532 | 26950 | - | GT5 |
| pfam | Rep_1191_c_47 | Rep_1191_c_47_26 | 27094 | 28209 | - | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_1191_c_47 | Rep_1191_c_47_27 | 28211 | 29383 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_1191_c_47 | Rep_1191_c_47_28 | 29412 | 31265 | - | GH13_9 |
| CAZyme | Rep_1191_c_47 | Rep_1191_c_47_29 | 31606 | 33456 | + | GH13_39 |
Gene ID: Rep_1191_c_47_23
Type: TC
Location: 22076 - 22885 (-)
Type: TC
Location: 22076 - 22885 (-)
Gene ID: Rep_1191_c_47_24
Type: CAZyme
Location: 23114 - 25507 (-)
Type: CAZyme
Location: 23114 - 25507 (-)
Gene ID: Rep_1191_c_47_25
Type: CAZyme
Location: 25532 - 26950 (-)
Type: CAZyme
Location: 25532 - 26950 (-)
Gene ID: Rep_1191_c_47_26
Type: pfam
Location: 27094 - 28209 (-)
Type: pfam
Location: 27094 - 28209 (-)
Gene ID: Rep_1191_c_47_27
Type: pfam
Location: 28211 - 29383 (-)
Type: pfam
Location: 28211 - 29383 (-)
Gene ID: Rep_1191_c_47_28
Type: CAZyme
Location: 29412 - 31265 (-)
Type: CAZyme
Location: 29412 - 31265 (-)
Gene ID: Rep_1191_c_47_29
Type: CAZyme
Location: 31606 - 33456 (+)
Type: CAZyme
Location: 31606 - 33456 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Gemellaceae
Genus
Gemella
Species
Gemella sp900766305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.