Cluster: Rep_1191_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1191
- CGC Family ID: CGCFAM_02690
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1191_c_18 | Rep_1191_c_18_6 | 4701 | 5765 | - | GT113 |
| CAZyme | Rep_1191_c_18 | Rep_1191_c_18_7 | 5792 | 6748 | - | GT2 |
| CAZyme | Rep_1191_c_18 | Rep_1191_c_18_8 | 6775 | 7767 | - | GT2 |
| CAZyme | Rep_1191_c_18 | Rep_1191_c_18_9 | 7781 | 8572 | - | GT111 |
| pfam | Rep_1191_c_18 | Rep_1191_c_18_10 | 8592 | 9584 | - | Stealth_CR2 | Stealth_CR1 |
| TC | Rep_1191_c_18 | Rep_1191_c_18_11 | 9707 | 10369 | - | 9.B.18.1.2 |
| TC | Rep_1191_c_18 | Rep_1191_c_18_12 | 10439 | 11143 | - | 8.A.3.2.3 |
| TC | Rep_1191_c_18 | Rep_1191_c_18_13 | 11155 | 11856 | - | 8.A.3.2.3 |
Gene ID: Rep_1191_c_18_6
Type: CAZyme
Location: 4701 - 5765 (-)
Type: CAZyme
Location: 4701 - 5765 (-)
Gene ID: Rep_1191_c_18_7
Type: CAZyme
Location: 5792 - 6748 (-)
Type: CAZyme
Location: 5792 - 6748 (-)
Gene ID: Rep_1191_c_18_8
Type: CAZyme
Location: 6775 - 7767 (-)
Type: CAZyme
Location: 6775 - 7767 (-)
Gene ID: Rep_1191_c_18_9
Type: CAZyme
Location: 7781 - 8572 (-)
Type: CAZyme
Location: 7781 - 8572 (-)
Gene ID: Rep_1191_c_18_10
Type: pfam
Location: 8592 - 9584 (-)
Type: pfam
Location: 8592 - 9584 (-)
Gene ID: Rep_1191_c_18_11
Type: TC
Location: 9707 - 10369 (-)
Type: TC
Location: 9707 - 10369 (-)
Gene ID: Rep_1191_c_18_12
Type: TC
Location: 10439 - 11143 (-)
Type: TC
Location: 10439 - 11143 (-)
Gene ID: Rep_1191_c_18_13
Type: TC
Location: 11155 - 11856 (-)
Type: TC
Location: 11155 - 11856 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Gemellaceae
Genus
Gemella
Species
Gemella sp900766305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.