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Cluster: Rep_1191_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1191_c_2 Rep_1191_c_2_2 1354 2313 - GT32
CAZyme Rep_1191_c_2 Rep_1191_c_2_3 2319 3314 - GT113
CAZyme Rep_1191_c_2 Rep_1191_c_2_4 3321 4283 - GT2
pfam Rep_1191_c_2 Rep_1191_c_2_5 4324 5433 - Glyphos_transf
CAZyme Rep_1191_c_2 Rep_1191_c_2_6 5435 6511 - GT4
pfam Rep_1191_c_2 Rep_1191_c_2_7 6516 6911 - CTP_transf_like
CAZyme Rep_1191_c_2 Rep_1191_c_2_8 6908 7741 - GT2
pfam Rep_1191_c_2 Rep_1191_c_2_9 7749 8855 - EpsG
TC Rep_1191_c_2 Rep_1191_c_2_10 8904 9563 - 8.A.3.2.1
Gene ID: Rep_1191_c_2_2
Type: CAZyme
Location: 1354 - 2313 (-)
Gene ID: Rep_1191_c_2_3
Type: CAZyme
Location: 2319 - 3314 (-)
Gene ID: Rep_1191_c_2_4
Type: CAZyme
Location: 3321 - 4283 (-)
Gene ID: Rep_1191_c_2_5
Type: pfam
Location: 4324 - 5433 (-)
Gene ID: Rep_1191_c_2_6
Type: CAZyme
Location: 5435 - 6511 (-)
Gene ID: Rep_1191_c_2_7
Type: pfam
Location: 6516 - 6911 (-)
Gene ID: Rep_1191_c_2_8
Type: CAZyme
Location: 6908 - 7741 (-)
Gene ID: Rep_1191_c_2_9
Type: pfam
Location: 7749 - 8855 (-)
Gene ID: Rep_1191_c_2_10
Type: TC
Location: 8904 - 9563 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Staphylococcales
→
Family
Gemellaceae
→
Genus
Gemella
→
Species
Gemella sp900766305

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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