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Cluster: Rep_1189_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1189_c_16 Rep_1189_c_16_58 67138 68847 + 4.C.1.1.4
pfam Rep_1189_c_16 Rep_1189_c_16_59 69051 70718 + FTHFS
CAZyme Rep_1189_c_16 Rep_1189_c_16_60 70796 71710 - GT51
pfam Rep_1189_c_16 Rep_1189_c_16_61 72165 73427 + tRNA-synt_1b | S4 | SYY_C-terminal
TF Rep_1189_c_16 Rep_1189_c_16_62 73503 73967 + MarR
TC Rep_1189_c_16 Rep_1189_c_16_63 74104 75522 + 2.A.1.3.51
peptidase Rep_1189_c_16 Rep_1189_c_16_64 75590 76837 - S01.UPC
pfam Rep_1189_c_16 Rep_1189_c_16_65 77054 77677 + Acyltransferase
TC Rep_1189_c_16 Rep_1189_c_16_66 77939 79408 + 4.A.1.1.7
Gene ID: Rep_1189_c_16_58
Type: TC
Location: 67138 - 68847 (+)
Gene ID: Rep_1189_c_16_59
Type: pfam
Location: 69051 - 70718 (+)
Gene ID: Rep_1189_c_16_60
Type: CAZyme
Location: 70796 - 71710 (-)
Gene ID: Rep_1189_c_16_61
Type: pfam
Location: 72165 - 73427 (+)
Gene ID: Rep_1189_c_16_62
Type: TF
Location: 73503 - 73967 (+)
Gene ID: Rep_1189_c_16_63
Type: TC
Location: 74104 - 75522 (+)
Gene ID: Rep_1189_c_16_64
Type: peptidase
Location: 75590 - 76837 (-)
Gene ID: Rep_1189_c_16_65
Type: pfam
Location: 77054 - 77677 (+)
Gene ID: Rep_1189_c_16_66
Type: TC
Location: 77939 - 79408 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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