dbCAN Logo

Cluster: Rep_1189_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1189_c_28 Rep_1189_c_28_329 318559 319944 + 1.A.26.1.3
STP Rep_1189_c_28 Rep_1189_c_28_330 319953 321797 + TrkA_C
pfam Rep_1189_c_28 Rep_1189_c_28_331 322152 322922 + adh_short | adh_short_C2
TC Rep_1189_c_28 Rep_1189_c_28_332 323104 324195 - 2.A.86.1.8
peptidase Rep_1189_c_28 Rep_1189_c_28_333 324460 325206 + S09.B07
pfam Rep_1189_c_28 Rep_1189_c_28_334 325365 325874 + LigT_PEase | 2_5_RNA_ligase2
TC Rep_1189_c_28 Rep_1189_c_28_335 326026 327216 - 2.A.1.2.44
CAZyme Rep_1189_c_28 Rep_1189_c_28_336 327194 328369 - GT28
Gene ID: Rep_1189_c_28_329
Type: TC
Location: 318559 - 319944 (+)
Gene ID: Rep_1189_c_28_330
Type: STP
Location: 319953 - 321797 (+)
Gene ID: Rep_1189_c_28_331
Type: pfam
Location: 322152 - 322922 (+)
Gene ID: Rep_1189_c_28_332
Type: TC
Location: 323104 - 324195 (-)
Gene ID: Rep_1189_c_28_333
Type: peptidase
Location: 324460 - 325206 (+)
Gene ID: Rep_1189_c_28_334
Type: pfam
Location: 325365 - 325874 (+)
Gene ID: Rep_1189_c_28_335
Type: TC
Location: 326026 - 327216 (-)
Gene ID: Rep_1189_c_28_336
Type: CAZyme
Location: 327194 - 328369 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List