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Cluster: Rep_1189_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1189_c_27 Rep_1189_c_27_192 173038 174183 + GT4
TC Rep_1189_c_27 Rep_1189_c_27_193 174238 175839 - 2.A.14.1.1
pfam Rep_1189_c_27 Rep_1189_c_27_194 176191 177870 + Glyphos_transf
NULL(UNKNOWN) Rep_1189_c_27 Rep_1189_c_27_195 177926 178522 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1189_c_27 Rep_1189_c_27_196 178847 181015 - GT2
pfam Rep_1189_c_27 Rep_1189_c_27_197 181415 181933 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10
TC Rep_1189_c_27 Rep_1189_c_27_198 182096 182317 + 2.A.64.3.2
TC Rep_1189_c_27 Rep_1189_c_27_199 182370 183035 + 2.A.64.3.2
TC Rep_1189_c_27 Rep_1189_c_27_200 183060 184778 - 2.A.108.2.5
pfam Rep_1189_c_27 Rep_1189_c_27_201 184759 185985 - Dyp_perox_N | Dyp_perox_C
TC Rep_1189_c_27 Rep_1189_c_27_202 185982 186836 - 2.A.108.2.3
Gene ID: Rep_1189_c_27_192
Type: CAZyme
Location: 173038 - 174183 (+)
Gene ID: Rep_1189_c_27_193
Type: TC
Location: 174238 - 175839 (-)
Gene ID: Rep_1189_c_27_194
Type: pfam
Location: 176191 - 177870 (+)
Gene ID: Rep_1189_c_27_195
Type:
Location: 177926 - 178522 (-)
Gene ID: Rep_1189_c_27_196
Type: CAZyme
Location: 178847 - 181015 (-)
Gene ID: Rep_1189_c_27_197
Type: pfam
Location: 181415 - 181933 (-)
Gene ID: Rep_1189_c_27_198
Type: TC
Location: 182096 - 182317 (+)
Gene ID: Rep_1189_c_27_199
Type: TC
Location: 182370 - 183035 (+)
Gene ID: Rep_1189_c_27_200
Type: TC
Location: 183060 - 184778 (-)
Gene ID: Rep_1189_c_27_201
Type: pfam
Location: 184759 - 185985 (-)
Gene ID: Rep_1189_c_27_202
Type: TC
Location: 185982 - 186836 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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