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Cluster: Rep_1189_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1189_c_27 Rep_1189_c_27_121 103886 104215 + 2.A.7.1.5
TC Rep_1189_c_27 Rep_1189_c_27_122 104218 104532 + 2.A.7.1.5
pfam Rep_1189_c_27 Rep_1189_c_27_123 104671 105630 + 2-Hacid_dh | 2-Hacid_dh_C
pfam Rep_1189_c_27 Rep_1189_c_27_124 105692 106816 - FAD_binding_3 | NAD_binding_8
CAZyme Rep_1189_c_27 Rep_1189_c_27_125 106960 107733 - GH73
NULL(UNKNOWN) Rep_1189_c_27 Rep_1189_c_27_126 107755 107976 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1189_c_27 Rep_1189_c_27_127 108145 108612 - DUF1641
TC Rep_1189_c_27 Rep_1189_c_27_128 108612 111566 - 3.D.1.9.2
Gene ID: Rep_1189_c_27_121
Type: TC
Location: 103886 - 104215 (+)
Gene ID: Rep_1189_c_27_122
Type: TC
Location: 104218 - 104532 (+)
Gene ID: Rep_1189_c_27_123
Type: pfam
Location: 104671 - 105630 (+)
Gene ID: Rep_1189_c_27_124
Type: pfam
Location: 105692 - 106816 (-)
Gene ID: Rep_1189_c_27_125
Type: CAZyme
Location: 106960 - 107733 (-)
Gene ID: Rep_1189_c_27_126
Type:
Location: 107755 - 107976 (-)
Gene ID: Rep_1189_c_27_127
Type: pfam
Location: 108145 - 108612 (-)
Gene ID: Rep_1189_c_27_128
Type: TC
Location: 108612 - 111566 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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