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Cluster: Rep_1187_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1187_c_2 Rep_1187_c_2_124 126911 129865 + 3.D.1.9.2
pfam Rep_1187_c_2 Rep_1187_c_2_125 129865 130335 + DUF1641
CAZyme Rep_1187_c_2 Rep_1187_c_2_126 130771 131544 + GH73
NULL(UNKNOWN) Rep_1187_c_2 Rep_1187_c_2_127 131633 131737 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1187_c_2 Rep_1187_c_2_128 132212 133168 - 2-Hacid_dh | 2-Hacid_dh_C
TC Rep_1187_c_2 Rep_1187_c_2_129 133234 133548 - 2.A.7.1.5
TC Rep_1187_c_2 Rep_1187_c_2_130 133548 133880 - 2.A.7.1.5
TC Rep_1187_c_2 Rep_1187_c_2_131 134293 134829 - 3.A.7.14.1
pfam Rep_1187_c_2 Rep_1187_c_2_132 135128 135550 - DUF4870
pfam Rep_1187_c_2 Rep_1187_c_2_133 135782 136855 + Octopine_DH
TC Rep_1187_c_2 Rep_1187_c_2_134 136898 138289 + 2.A.35.1.2
Gene ID: Rep_1187_c_2_124
Type: TC
Location: 126911 - 129865 (+)
Gene ID: Rep_1187_c_2_125
Type: pfam
Location: 129865 - 130335 (+)
Gene ID: Rep_1187_c_2_126
Type: CAZyme
Location: 130771 - 131544 (+)
Gene ID: Rep_1187_c_2_127
Type:
Location: 131633 - 131737 (-)
Gene ID: Rep_1187_c_2_128
Type: pfam
Location: 132212 - 133168 (-)
Gene ID: Rep_1187_c_2_129
Type: TC
Location: 133234 - 133548 (-)
Gene ID: Rep_1187_c_2_130
Type: TC
Location: 133548 - 133880 (-)
Gene ID: Rep_1187_c_2_131
Type: TC
Location: 134293 - 134829 (-)
Gene ID: Rep_1187_c_2_132
Type: pfam
Location: 135128 - 135550 (-)
Gene ID: Rep_1187_c_2_133
Type: pfam
Location: 135782 - 136855 (+)
Gene ID: Rep_1187_c_2_134
Type: TC
Location: 136898 - 138289 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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