Cluster: Rep_1187_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1187
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1187_c_2 | Rep_1187_c_2_116 | 117786 | 119165 | + | 2.A.3.1.15 |
| TF | Rep_1187_c_2 | Rep_1187_c_2_117 | 119306 | 120178 | - | HTH_6 |
| TC | Rep_1187_c_2 | Rep_1187_c_2_118 | 120182 | 121570 | - | 4.A.1.2.7 |
| STP | Rep_1187_c_2 | Rep_1187_c_2_119 | 121584 | 122471 | - | SIS |
| CAZyme | Rep_1187_c_2 | Rep_1187_c_2_120 | 122468 | 123517 | - | GH170 |
Gene ID: Rep_1187_c_2_116
Type: TC
Location: 117786 - 119165 (+)
Type: TC
Location: 117786 - 119165 (+)
Gene ID: Rep_1187_c_2_117
Type: TF
Location: 119306 - 120178 (-)
Type: TF
Location: 119306 - 120178 (-)
Gene ID: Rep_1187_c_2_118
Type: TC
Location: 120182 - 121570 (-)
Type: TC
Location: 120182 - 121570 (-)
Gene ID: Rep_1187_c_2_119
Type: STP
Location: 121584 - 122471 (-)
Type: STP
Location: 121584 - 122471 (-)
Gene ID: Rep_1187_c_2_120
Type: CAZyme
Location: 122468 - 123517 (-)
Type: CAZyme
Location: 122468 - 123517 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Staphylococcaceae
Genus
Staphylococcus
Species
Staphylococcus lugdunensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.