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Cluster: Rep_1187_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1187_c_15 Rep_1187_c_15_38 37452 39233 + 3.A.1.21.1
TC Rep_1187_c_15 Rep_1187_c_15_39 39230 40972 + 3.A.1.106.2
TC Rep_1187_c_15 Rep_1187_c_15_40 41177 42199 + 3.A.1.24.1
TC Rep_1187_c_15 Rep_1187_c_15_41 42202 42861 + 3.A.1.24.4
TC Rep_1187_c_15 Rep_1187_c_15_42 42893 43732 + 3.A.1.24.3
CAZyme Rep_1187_c_15 Rep_1187_c_15_43 44586 45557 + CBM50 | CBM50 | CBM50
NULL(UNKNOWN) Rep_1187_c_15 Rep_1187_c_15_44 45763 46032 - NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_1187_c_15 Rep_1187_c_15_45 46161 46547 + NUDIX
TC Rep_1187_c_15 Rep_1187_c_15_46 46880 47662 - 9.B.141.1.2
Gene ID: Rep_1187_c_15_38
Type: TC
Location: 37452 - 39233 (+)
Gene ID: Rep_1187_c_15_39
Type: TC
Location: 39230 - 40972 (+)
Gene ID: Rep_1187_c_15_40
Type: TC
Location: 41177 - 42199 (+)
Gene ID: Rep_1187_c_15_41
Type: TC
Location: 42202 - 42861 (+)
Gene ID: Rep_1187_c_15_42
Type: TC
Location: 42893 - 43732 (+)
Gene ID: Rep_1187_c_15_43
Type: CAZyme
Location: 44586 - 45557 (+)
Gene ID: Rep_1187_c_15_44
Type:
Location: 45763 - 46032 (-)
Gene ID: Rep_1187_c_15_45
Type: STP
Location: 46161 - 46547 (+)
Gene ID: Rep_1187_c_15_46
Type: TC
Location: 46880 - 47662 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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