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Cluster: Rep_1158_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1158_c_2 Rep_1158_c_2_103 103713 106067 + 3.A.3.23.2
pfam Rep_1158_c_2 Rep_1158_c_2_104 106174 106920 + UPF0020 | Cons_hypoth95 | MTS | Methyltransf_16 | Methyltransf_25
pfam Rep_1158_c_2 Rep_1158_c_2_105 106910 107167 + GIY-YIG
CAZyme Rep_1158_c_2 Rep_1158_c_2_106 107201 109429 - CBM61 | GH53
TC Rep_1158_c_2 Rep_1158_c_2_107 109542 111197 - 4.A.3.1.1
TC Rep_1158_c_2 Rep_1158_c_2_108 111202 111525 - 4.A.3.1.3
CAZyme Rep_1158_c_2 Rep_1158_c_2_109 111538 112938 - GH1
Gene ID: Rep_1158_c_2_103
Type: TC
Location: 103713 - 106067 (+)
Gene ID: Rep_1158_c_2_104
Type: pfam
Location: 106174 - 106920 (+)
Gene ID: Rep_1158_c_2_105
Type: pfam
Location: 106910 - 107167 (+)
Gene ID: Rep_1158_c_2_106
Type: CAZyme
Location: 107201 - 109429 (-)
Gene ID: Rep_1158_c_2_107
Type: TC
Location: 109542 - 111197 (-)
Gene ID: Rep_1158_c_2_108
Type: TC
Location: 111202 - 111525 (-)
Gene ID: Rep_1158_c_2_109
Type: CAZyme
Location: 111538 - 112938 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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