Cluster: Rep_1158_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1158
- CGC Family ID: CGCFAM_00097
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1158_c_22 | Rep_1158_c_22_3 | 907 | 2136 | + | 4.C.3.1.1 |
| CAZyme | Rep_1158_c_22 | Rep_1158_c_22_4 | 2231 | 3694 | - | GH32 |
| TC | Rep_1158_c_22 | Rep_1158_c_22_5 | 3702 | 4553 | - | 3.A.1.1.20 |
| TC | Rep_1158_c_22 | Rep_1158_c_22_6 | 4555 | 5439 | - | 3.A.1.1.20 |
| TC | Rep_1158_c_22 | Rep_1158_c_22_7 | 5527 | 6840 | - | 3.A.1.1.20 |
Gene ID: Rep_1158_c_22_3
Type: TC
Location: 907 - 2136 (+)
Type: TC
Location: 907 - 2136 (+)
Gene ID: Rep_1158_c_22_4
Type: CAZyme
Location: 2231 - 3694 (-)
Type: CAZyme
Location: 2231 - 3694 (-)
Gene ID: Rep_1158_c_22_5
Type: TC
Location: 3702 - 4553 (-)
Type: TC
Location: 3702 - 4553 (-)
Gene ID: Rep_1158_c_22_6
Type: TC
Location: 4555 - 5439 (-)
Type: TC
Location: 4555 - 5439 (-)
Gene ID: Rep_1158_c_22_7
Type: TC
Location: 5527 - 6840 (-)
Type: TC
Location: 5527 - 6840 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.