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Cluster: Rep_1158_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1158_c_11 Rep_1158_c_11_4 2186 4405 - GT51
pfam Rep_1158_c_11 Rep_1158_c_11_5 4544 5404 + PseudoU_synth_2
STP Rep_1158_c_11 Rep_1158_c_11_6 5689 5898 - HMA
TC Rep_1158_c_11 Rep_1158_c_11_7 5911 8163 - 3.A.3.5.15
TF Rep_1158_c_11 Rep_1158_c_11_8 8167 8634 - Pencillinase_R
TC Rep_1158_c_11 Rep_1158_c_11_9 8778 10280 - 3.A.1.15.3
TC Rep_1158_c_11 Rep_1158_c_11_10 10290 11096 - 3.A.1.15.3
TC Rep_1158_c_11 Rep_1158_c_11_11 11089 11796 - 3.A.1.15.3
Gene ID: Rep_1158_c_11_4
Type: CAZyme
Location: 2186 - 4405 (-)
Gene ID: Rep_1158_c_11_5
Type: pfam
Location: 4544 - 5404 (+)
Gene ID: Rep_1158_c_11_6
Type: STP
Location: 5689 - 5898 (-)
Gene ID: Rep_1158_c_11_7
Type: TC
Location: 5911 - 8163 (-)
Gene ID: Rep_1158_c_11_8
Type: TF
Location: 8167 - 8634 (-)
Gene ID: Rep_1158_c_11_9
Type: TC
Location: 8778 - 10280 (-)
Gene ID: Rep_1158_c_11_10
Type: TC
Location: 10290 - 11096 (-)
Gene ID: Rep_1158_c_11_11
Type: TC
Location: 11089 - 11796 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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