Cluster: Rep_1158_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_1158
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1158_c_0 | Rep_1158_c_0_173 | 179031 | 180782 | - | GT4 |
| TC | Rep_1158_c_0 | Rep_1158_c_0_174 | 180807 | 182027 | - | 3.A.1.103.5 |
| pfam | Rep_1158_c_0 | Rep_1158_c_0_175 | 182027 | 182833 | - | ABC2_membrane |
| CAZyme | Rep_1158_c_0 | Rep_1158_c_0_176 | 182836 | 183771 | - | GT2 |
| CAZyme | Rep_1158_c_0 | Rep_1158_c_0_177 | 183768 | 184916 | - | GT4 |
| pfam | Rep_1158_c_0 | Rep_1158_c_0_178 | 185019 | 185870 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | Rep_1158_c_0 | Rep_1158_c_0_179 | 185943 | 186869 | - | GT2 |
| pfam | Rep_1158_c_0 | Rep_1158_c_0_180 | 186973 | 187623 | - | Excalibur | DUF5648 |
| pfam | Rep_1158_c_0 | Rep_1158_c_0_181 | 187649 | 189163 | - | DUF2142 |
| CAZyme | Rep_1158_c_0 | Rep_1158_c_0_182 | 189227 | 190228 | - | GT2 |
| NULL(UNKNOWN) | Rep_1158_c_0 | Rep_1158_c_0_183 | 190218 | 191501 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1158_c_0 | Rep_1158_c_0_184 | 191485 | 191826 | - | DUF2304 |
| CAZyme | Rep_1158_c_0 | Rep_1158_c_0_185 | 191833 | 192528 | - | GT2 |
Gene ID: Rep_1158_c_0_173
Type: CAZyme
Location: 179031 - 180782 (-)
Type: CAZyme
Location: 179031 - 180782 (-)
Gene ID: Rep_1158_c_0_174
Type: TC
Location: 180807 - 182027 (-)
Type: TC
Location: 180807 - 182027 (-)
Gene ID: Rep_1158_c_0_175
Type: pfam
Location: 182027 - 182833 (-)
Type: pfam
Location: 182027 - 182833 (-)
Gene ID: Rep_1158_c_0_176
Type: CAZyme
Location: 182836 - 183771 (-)
Type: CAZyme
Location: 182836 - 183771 (-)
Gene ID: Rep_1158_c_0_177
Type: CAZyme
Location: 183768 - 184916 (-)
Type: CAZyme
Location: 183768 - 184916 (-)
Gene ID: Rep_1158_c_0_178
Type: pfam
Location: 185019 - 185870 (-)
Type: pfam
Location: 185019 - 185870 (-)
Gene ID: Rep_1158_c_0_179
Type: CAZyme
Location: 185943 - 186869 (-)
Type: CAZyme
Location: 185943 - 186869 (-)
Gene ID: Rep_1158_c_0_180
Type: pfam
Location: 186973 - 187623 (-)
Type: pfam
Location: 186973 - 187623 (-)
Gene ID: Rep_1158_c_0_181
Type: pfam
Location: 187649 - 189163 (-)
Type: pfam
Location: 187649 - 189163 (-)
Gene ID: Rep_1158_c_0_182
Type: CAZyme
Location: 189227 - 190228 (-)
Type: CAZyme
Location: 189227 - 190228 (-)
Gene ID: Rep_1158_c_0_183
Type:
Location: 190218 - 191501 (-)
Type:
Location: 190218 - 191501 (-)
Gene ID: Rep_1158_c_0_184
Type: pfam
Location: 191485 - 191826 (-)
Type: pfam
Location: 191485 - 191826 (-)
Gene ID: Rep_1158_c_0_185
Type: CAZyme
Location: 191833 - 192528 (-)
Type: CAZyme
Location: 191833 - 192528 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.