Cluster: Rep_1158_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1158
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1158_c_5 | Rep_1158_c_5_63 | 61561 | 63744 | + | 3.A.1.3.25 |
| TC | Rep_1158_c_5 | Rep_1158_c_5_64 | 63744 | 64484 | + | 3.A.1.3.25 |
| TC | Rep_1158_c_5 | Rep_1158_c_5_65 | 64908 | 66443 | + | 3.A.1.121.3 |
| TC | Rep_1158_c_5 | Rep_1158_c_5_66 | 66464 | 68212 | - | 3.A.1.135.5 |
| TC | Rep_1158_c_5 | Rep_1158_c_5_67 | 68193 | 69938 | - | 3.A.1.135.5 |
| CAZyme | Rep_1158_c_5 | Rep_1158_c_5_68 | 70111 | 70818 | - | GH73 |
Gene ID: Rep_1158_c_5_63
Type: TC
Location: 61561 - 63744 (+)
Type: TC
Location: 61561 - 63744 (+)
Gene ID: Rep_1158_c_5_64
Type: TC
Location: 63744 - 64484 (+)
Type: TC
Location: 63744 - 64484 (+)
Gene ID: Rep_1158_c_5_65
Type: TC
Location: 64908 - 66443 (+)
Type: TC
Location: 64908 - 66443 (+)
Gene ID: Rep_1158_c_5_66
Type: TC
Location: 66464 - 68212 (-)
Type: TC
Location: 66464 - 68212 (-)
Gene ID: Rep_1158_c_5_67
Type: TC
Location: 68193 - 69938 (-)
Type: TC
Location: 68193 - 69938 (-)
Gene ID: Rep_1158_c_5_68
Type: CAZyme
Location: 70111 - 70818 (-)
Type: CAZyme
Location: 70111 - 70818 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.