Cluster: Rep_1158_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1158
- CGC Family ID: CGCFAM_06421
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1158_c_4 | Rep_1158_c_4_29 | 25889 | 27013 | + | 2.A.86.1.8 |
| NULL(UNKNOWN) | Rep_1158_c_4 | Rep_1158_c_4_30 | 26985 | 27101 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1158_c_4 | Rep_1158_c_4_31 | 27265 | 28914 | + | PEPCK_ATP |
| TC | Rep_1158_c_4 | Rep_1158_c_4_32 | 29003 | 30343 | + | 9.A.40.2.1 |
| TF | Rep_1158_c_4 | Rep_1158_c_4_33 | 30495 | 31205 | - | GntR |
| TC | Rep_1158_c_4 | Rep_1158_c_4_34 | 31385 | 33394 | + | 4.A.1.2.13 |
| CAZyme | Rep_1158_c_4 | Rep_1158_c_4_35 | 33602 | 35233 | + | GH13_29 |
Gene ID: Rep_1158_c_4_29
Type: TC
Location: 25889 - 27013 (+)
Type: TC
Location: 25889 - 27013 (+)
Gene ID: Rep_1158_c_4_30
Type:
Location: 26985 - 27101 (+)
Type:
Location: 26985 - 27101 (+)
Gene ID: Rep_1158_c_4_31
Type: pfam
Location: 27265 - 28914 (+)
Type: pfam
Location: 27265 - 28914 (+)
Gene ID: Rep_1158_c_4_32
Type: TC
Location: 29003 - 30343 (+)
Type: TC
Location: 29003 - 30343 (+)
Gene ID: Rep_1158_c_4_33
Type: TF
Location: 30495 - 31205 (-)
Type: TF
Location: 30495 - 31205 (-)
Gene ID: Rep_1158_c_4_34
Type: TC
Location: 31385 - 33394 (+)
Type: TC
Location: 31385 - 33394 (+)
Gene ID: Rep_1158_c_4_35
Type: CAZyme
Location: 33602 - 35233 (+)
Type: CAZyme
Location: 33602 - 35233 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.